CDS

Accession Number TCMCG013C31691
gbkey CDS
Protein Id XP_006489854.1
Location join(9949494..9949562,9949661..9949783,9949907..9950064,9950320..9950364,9951495..9951573,9951695..9951768,9952868..9952974,9953702..9953884,9954341..9954538,9954664..9954880,9954968..9955042,9955126..9955478,9955831..9956023,9956137..9956398,9956489..9956828,9957004..9957184,9957289..9957429,9957522..9957783,9957938..9958396,9958963..9959420,9960867..9960997,9961074..9961255,9961350..9961733,9961936..9962061,9962436..9962501,9962587..9964400,9964482..9964761,9965464..9965694,9966267..9966797,9966971..9967103,9967302..9967558)
Gene LOC102625218
GeneID 102625218
Organism Citrus sinensis

Protein

Length 2703aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA225998
db_source XM_006489791.3
Definition small subunit processome component 20 homolog isoform X1 [Citrus sinensis]

EGGNOG-MAPPER Annotation

COG_category V
Description Small subunit processome component 20 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCGACGGCAGAACACGCTGCGGCCGTCAAGTCTCTCAACAAGTCCCCCGGCCGTCGCCGCTTCGTCTTTAAGAGTTTCTCTCAACAAATAGATGACATCGAAATCAATGTATTCAGAAGCCTTGATAAGGTTAAAGCCGAGCCATCGGAGGGCTCCTCATTTTTTCGCGATTGCCTCATTGAATGGAGAGAATTAAATACTGCAGAGGATTTTATTTCCTTTTACGAGGAAATTATGCCTTTTGTACAGACTCTGCCTTCAATAATATTGCACAAGGAATTAATATTCTCAAAACTTATTTCGAGATTACGTTTTGAAGCAAGACTATCACTTGAGCCTATTCTCAGGCTGATTGCAGCTTTATCAAGGGATCTCCTTAAGGATTTTTTACTTTTTTTGCCTAGGATTGCTGATTCTCTGGTTTCTCTCCTGGAAAGTGGTGCTGATAGGGAGCCAGATATTGTTGAGCAGATTTTTACTTCTTGGTCATTTATCATGATGTATTTGCAGAAATATCTTATTCAAGATATAATAAGTGTTCTCAAGATCACGGTAAAACTAAGATATTACTCAAAGGATTATATCCAGGAATTTATGGCTGAGGCTACATCATTCTTGCTGAGGAATGCACCTTTTAAGAAGCTTAAAGCAGGTATCCAAAAGATCATGTTAGAGGTTGTGAAGAAACAATCACCTGCCCGAAAATCTGGAGTCAGTGCTTTGCTTTATTATGTTATGAGAGGAACATCATCAGGGGTTCATTCAAGTGCAGAGCGAGTTTTGAAGTTATTGATTAGCCAGTCTGTATTTTCTATTGGTGATAAGTTCAATCAAGGTTCAGACACTATTGTTGAAGTTCTGATCACAGCTTTTCAGAGAATATGTTCTAATCTGGGATCAAAGGAGTTTATGTGGGAAAACTTATATCGAGAAATAATTGACTCTGTAGATAATAGATGCCTTTTTCATCTTGGTTGCCTTTTGTCACTGCTTATTGCTACGGTTGAAATTGATAATGATCAAGGAGTTTCTGATTATCAACCAGTGCTTGAACTTGTGGATGTTCTTAAACGTGCGTTTATCACGCCTTCCAAGAATGTTAAGGATGTAGATCATTTATTTGAAGTTGTTGATAAGGTTCTGCAACTAATGCTGTGCATTCTCAGTGGGCTTCATGGAGCAAATGATATGGACACTATCACAGACTGTTCTTCGCAATGGGCTCCTGCATTTGAGTTGAAGAATTCAAGTTTGTTGAAATTTATTGGAAAGCTACTACAATTGGACCCTTGCGTAGTCTATACATTTAGAGTGAATATATTAAGTGCGATAAATGATATGATAGAAAATTCACAGGACGAAGTTATTTGTCTACTGTTGTCCTTCTTTGACAAACTGCAAATGGAACCTGAATGCTGTAACTTCTTAGATGGAGTATCAGAAGGACGAGTCTTGAGGATTCGCGGTTTCTTGCAGGAGGCTGTCTGCTCTTGGATCAGTGTGATAAATAATGTTGTTGCTCATGGAAATTCATCATCTATTGAAATTGATAAGGCTAAATTGGCTCTGCTTTGGGGAATTGTCAGATGCTATCCTCGTATAATGGATGTGCAAGCAAACTCATCGTTGCTGATGGAGCTGATAGATGCACTTCATCGGCTTTCAATGGATGAAGCTGAACCTTTTGCAGGTGTTTCTAAGCACATATGGCAAAGCCTAATTGGAGCTTCTTTATCTTCCTATCATGAATTGCATTGTGCGAAGCAATCTGGACTTGAAGAAACATGCAAAGTTCTTCATCTTGCTAAAACCTGCAAATCATCCTCACAAGTATTGTGTGCTGTTGCTGATTATTTAGATTATGTGCATAGTAGAACTATATTGCCAGCAGACAATAGCCATGGAAAATACCACCCAGAGCTAGAAGCAGAAAAGGTTGAGGACGTAGTTGTCATATATGCAGATAATTTGTGCCACTCAGACAAGGCAATCCGTGTTCCAACTCTTAGAATCTTGTGTCACTACGAACCTTTAACTTATGAAGACTCTACGATGGATCAACCGCCTGAGAAGAAAATGAAAACTGAAACTGGTGTTCCTCATGCTTGCCCTGTGGATATTCATGGCTGTAATGTTATTCATCTGCTTCTCTCCATTGAGGCAACACCTCTTTCAATATCTACAAGCAGGAAGTTATCCCTGCTCATCTCTAGAATACATATGGACCTAGCCGCTGGAAGGATATCTGAAACTTATATACCCCTTGTGTTGAATGGGGTTCTTGGTATCTTCCATAATCGTTTTAGCTATCTCTGGAATCCAGCATCTGAGTGCCTTGCAGTTCTGATTAGCAAGCATGTTGGATTTGTGTGGAATAAACTTGTTCGTTACTTTCAACATTGTCAATCCATTTTTCAGATATCTCAAGATGAACTTGACAAGCCGAGTTTTAAGTTACCTGACAAGTCTGCTGATCTGGTCGAGCGTTTTAATTTGTTTGTTTCTCCGGCGTCTGATAGCACCCCACATGGAACAGTGTTGTCTCTGTTGCTTCAGTCCTTGCAAAAAATTCCTTCTGTTGTTGAGGCTCAGTCTCGACAAGTTATACCTCTGTTCTTGGACTTTTTGGCCTACAATATTGACAATCTTGTAAGTGTGAGATCATTCAATTCAAGTATTTGCAAAGGCAAAGAGTGGAAGAGTGTCCTTAAAGAATGGCTGAACTTGTTGAAACTGATGCGAAACCCCAAGACTTTTTATAAAAGTCAATTTTTAAAGGATGTTCTACAAAATAGGCTTCTGGATGAAAATGATGCTGAAATACAGATGAAGGTTCTTGATTGCCTTTTGGTGTGGAAAGATGATTTCTTAATCCCTTATCATCAGCATTTAAGAAACTTGATCAATTCAAAAAGTTTGAGAGAAGAACTAACAACATGGAGTTTATCTAGAGAATCGCATCTAATTGAAGATGATCACAGATCTAATCTTGTGCCTTTGGTTATTTGTCTCTTGATGCCAAAAGTCAGAAAATTGAAGACACTTGCCTCTCGAAAGCATGCAAGTATATATCATCGAAAGGCGGTTCTGTGTTTCGTAGCTCAACTAGATGTTGATGAACTCCCTCTCTTCTTTGCATTGTTAATAAAGTCCTTGGAAATAATTCCCAAGGGAACTGATGATGGAGCATTTTGGGAAAAACCCTATTGCAATATGGAGGAATTTCAAGAATATAGTTTCTTGAAGTTTTTCACCATAGAAAACTTAGCATCTCTGTCGTGGAAAAAGAGTCATGGTTTTCTGCACGTAATTGAAGACGTTATTCGAGTTTTTGATGAATTACATGTTGGGCCTTTTCTTAATTTACTGATTGGATGTGTTGTTCGGGTATTGGCAAGCTGCACTTCAAGTCTTGATTTTTTAAAAGGTTGCGGATCTTCTGTAGTGGAAAATCATGCAAATACTGACTCAACTTTACTGGCGAAAGACAATCTTGCAGGAAAAAATCAGGGCCAGATCAGTTCAGCCATGAAGCAGCTCAAGGATATAAGATCTTTATGTCTGAGAATACTTTCCACTGTTCTTAATAAGTATGGGGATCATGATTATGATTGTGATTTCTGGGACCTGTTCTTTCAGTCGGTGAAACCTTTGATCGATGCTTTCAAGCAGGAGGGTTCTAGTAGTGAGAAACCAAGTTCACTGTTCTCTTGCTTTTTGGCCATGAGCAGAAGCCACAGGCTTGTATCTCTATTAGAAAGGGAAGAAAATCTGATCCCTGATATATTTTCAATTTTAACTGTCATGACTGCCTCTGAAGCAATTGTATCAAGTGTTCTGAAGTTCATTGAGAACCTGTTGAATCTTGATAATGAGGTGGATGGTGAATACAGTGCTATTAAAAAAGTTCTACTGCCAAATGTTGCAACACTTATCAGCAGCCTGCATTTTCTCTTTCAGTGTGCAGCCAAGAGGAAATTGGTCAATGGGGAGACTGTGATTAGAATTTTGCAATTGTTATCCCAGTATATTAAAGATCCATTGGAAGCTGGGAAGTTTTTGGATATCTTGCTACCCTTCTTAGCAAAGGGAGTTAAAGATTCAGAAGTCGTAGTGAAAGTTCTGCATGTTCTTCGTGATATCATACCAGTAGCAGGGACTGGGAGTACTAAAAAAGTTCTCAATGCACTTTCTCCACTTCTTGCTTATGTCGAGTTGGATATGCGGTCTTCTATCTGTGATCTTCTTGATTCTCTCGCAAAAGCTGACCCTTCTGTGTTCCCTGTGGCAAAACTTGTCTCTGAGTTGAATGCAACCTCTGCTGTAGAAATGGGTGGCCTTGATTATGATTCTATAGTTACAGCATATGACAAGATTGGCATTGATTTATTCCATACTATAGAAGTGGACCACTCATTAGTCATTTTGTCACACTGTGTGCGCGATATGTCATCAGACGAAATGATCCTGAGGCATAGTGCATATCGATCACTTCTCTCATTTGTTGAATTTTCTTCTCTAATTCTCAATAGAGAAAGGTGCAATACACGTGAAGTGATGCAAGCAGTTGATGACGGTTTGTGGACAATAGGATCCATTCAGCGCATAATAAACAAGTTTATCTTGAAGCGTATGGGTGAGGCAATGACCAGAGGAAGTAACGTGAAAAAGGAATGGGTTGATTTACTGAGAGAGATGGTGTTGAAGCTCCCACAATTATCAAATCTTAATTCACTGAAAGACCTGTGCTCTGGGGATACTGAAGTAGATTTTTTCAATAATATTATTCACTTGCAGAAACATAGGAGAGCACGAGCACTGACACGCTTTAGGAAAGTTGTTAGTGCAAGCAACACATCAGAGGGACTTGTGAATAAAGTGTTTGTCCCACTATTTTTCAACATGTTGTTTGATGTACAAGACGAAAATGTTAGAAGTGCATGCTCTGAAGCTCTTGCTTCAATTTCCACTCATTTGAAATGGAAGTCATACTCTGCTTTGTTGATGAGATGCTTTCAGGAGATGGAAAAGAATCCACAGAAGCAAAAGATTTTGCTGAGGCTATTTTGCTCTATTTTGGATGAGTTCCATTTTTCTCAACTTTGTTCCAGCCAAGAAGCCAATGACCCTTCGACTAATGCTTTAGATGCTAACCTTGATAATAATAGTTCTTCAATTATATTGCAAAATTGTCATAATTCTATGACGATCACAGAGATAAAGACATGCCTTTATGACACTATGCTCCCAAAGTTGCAAAAGCTACTGTATGCTGATTCTGAGAAGGCCAATGTTGACATCAGTCGAGCTGTGTTGAAAGTACTGAAGTTGCTTCCAGGAGACATAATGGACTCACAACTTCCGAGTATCATTCATCGCATTTCAAACTTCTTAAAGAGTCGTTCGGATGGCATTCGCAATAGTGCTAGGATAGCTTTAGCTGATTGTTTGAAGGAGCTTGGGCTGGAATACTTGCAGTTTATCGTACGGGTTTTGCGATCTATCTTGAAGCGGGGCTATGAGCTGCATGTGATGGGATACACACTCAACTTTATTTTGTCAAAATCTCTTTCAAGATCCACCAGCTGTAAGTTGGATTATTGTTTGGAAGAACTGCTATCTGTAGCGGGGAATGATATTCTTGGAGATGTTGCTGAACAGAAAGAGGTGGAAAAAATTGCTTCTAAAATGATTGAAACTAGGAAACAAAAATCTTTTGAGACTCTGGAATTGATTGCCCAGAACATAACATTTCGAAGTCATGCCTCAAAACTTCTCTCTGTTGTAACTGCTCATTTGCAGAATCATCTGACACCAAAAGTGAAGTCAAAATTGGAAAGCATGCTAAATCACATTGCTGCTGGTATTGAACGCAACCCCTCAGTGGACCAAACTGACCTATTTGTCTTCATATATGACCTTGTTAAAAAACAAATTGAGGAAGAAAATGATCTGCATGCAAATTCTTCTAGTAAAGGAGCCAACAATTATAAAAATGATGTGAGAGGGAAAACCATTTCTTCAGGGCGGGTAATCGTTGCTAAATCAACATGTTCACATCTTATAACAGTGTTTGCTCTTGGACTACTGCACAAACGTTTAAAGAATTTGAAATTGAAGAAACATGATGAAGAACTGTTATCAAAGTTGGATTCCTTTGTGACAATACTGGGCAATTGCTTGAGTTCCAAGTATGAAGATATTTTGTCAGCATCCCTTAGATGTCTTGCCCCATTAATAAGTCTGCCACTGCCGTCTCTCAAATCCCAAGCTGATAAGATGAAGGCTACTCTGTTGGATATCGCCCACGGTTCAGCAACTTCCAGCAGTCTGTTAATGCAGTCATGTCTAAATTTGTTGACTAAGCTTCTGCGCACCACTGATATTACCCTTTCTGCAGATCAACTGCATGAGTTAATTCAATTTCCTTTGTTTGTTGATCTTGAAAGGAATCCCTCTGATGTAGCTCTTTCACTTCTAAAGGCGATTGTTAATCGCAAGCTAGTCGTTCCTGAGATATATGATGTTGTAATTCAAGTTGCAGAGCTGATGGTAACAAGTCAAGAAGAATCAATTCGCAAGAAATGCAGCCATATTTTGTTGCAATTCTTGCTTGATTATCAACTTTCAGATAAACGGTTGCAACAACATTTGGATTTTCTGCTGGCAAATCTGAGTTATAAGCATCCAAGTGGAAGGGAAGCCGTGCTTGAAATGCTACATGTAATTATAAAGAAATTTCCACAAACTAAATTGGATGAGCAATCTAACACGTTATTTCTCCATTTGGTGTTCCGTTTGGTTAATGACCCTGATAATACAGTCCGGTTAATGATTGGTGTAGCTCTAAAACTGCTTGTTGGACGCATAAGTTCACATTCGCTATATTCCATACTGGAGTACAGTCTATCTTGGTATTTAGACGGAATGCAGCAACTCCAGAGTGCTGGTGCACAGGTCTTGGGATTGCTGGTTGAAGTTATGAAGAAAGACTTTCAGGAGCATATTGATATTGTATTGCAAGAGGCAATAAGCATTTTACAATCCACTAAAAATATTGTGGAACAGCAACTGGATCTTCCTGATGAGACCACCATTCCCTTCTGGAAAGATGCGTACTATTCACTAGTTCTGTTGGAGAAGATCCTCTGTCACTTCCCTGATATTTTGCTGGATACGCGTCTGGAGAATTTATGGGAAGCAATTTGTGAGTTGTTGTTGCACCCCCATACATGGTTGCGTAATATATCAAATCGCCTTATAGCCATGTATTTTGCTGCTGTTACTGAAGCTCGCAGGGAAGACGGGGAGAAGTCATTTGGAGATTTCTTCCTGATTAAGCCAAGTAGAGTCTTTATGATAGCTGTTTCACTATGCTGTCAGCTAGAGACCCAAGATTCTTTTGATGATGCTTTCAGCAACCATATTACCGAGAATCTTGTGTCTGCAATCTGTAATATGCATTCTTTCAGAGGATATATGGAATGTGCAGATTTTCAAAACTTCTGGTCTAACCTTGGACAACATGAGCAGGGTCTATTTCTTAGAGCTTTTCAGTTGCTTGACTTGAGAAAAGGAAGAGGATTGTTTCTATCTATTATCTCTGGAGCAGGTGACCAAAATGATTGTCTTGCCTCTGGTGATTTCCAGTATTTGCTCGTCTCCAATTTGCTCAAAAAGATGGGAAAGATTGCTCTTCAAAAGGATGCTACTATTCAGATGAAAATCATCTTCAACACTTTTAGGCTCATTTCATCAAAAATTAGTCAGGACTACTTGCAGCGCTACGTGGTTCATATGCTGCCATCATTGTATAAAGTTTGTGAAGGATTTGCGGGGAAGAATATCCCTGATGATCTAAAGCAATTAGCAAAAGAAGTAAGTGATAGCATACGGGACACATTAGGCGGCCAGATTTTTGTACAGGTCTATAATGAGATCAGAAAGAATCTCAAGGCAAAAAGGGATAAGAGGAAACAAGAGGACAAGCGTATGGCAGTAGTCAACCCAATGCGGAATGCCAAGAGGAAGTTGAGAGTTGCTGCCAAGCATCGTGCCAACAAGAAGAGGAAGATTATGACAATGAGAATGGGGAGATGGTTACGTTAG
Protein:  
MATAEHAAAVKSLNKSPGRRRFVFKSFSQQIDDIEINVFRSLDKVKAEPSEGSSFFRDCLIEWRELNTAEDFISFYEEIMPFVQTLPSIILHKELIFSKLISRLRFEARLSLEPILRLIAALSRDLLKDFLLFLPRIADSLVSLLESGADREPDIVEQIFTSWSFIMMYLQKYLIQDIISVLKITVKLRYYSKDYIQEFMAEATSFLLRNAPFKKLKAGIQKIMLEVVKKQSPARKSGVSALLYYVMRGTSSGVHSSAERVLKLLISQSVFSIGDKFNQGSDTIVEVLITAFQRICSNLGSKEFMWENLYREIIDSVDNRCLFHLGCLLSLLIATVEIDNDQGVSDYQPVLELVDVLKRAFITPSKNVKDVDHLFEVVDKVLQLMLCILSGLHGANDMDTITDCSSQWAPAFELKNSSLLKFIGKLLQLDPCVVYTFRVNILSAINDMIENSQDEVICLLLSFFDKLQMEPECCNFLDGVSEGRVLRIRGFLQEAVCSWISVINNVVAHGNSSSIEIDKAKLALLWGIVRCYPRIMDVQANSSLLMELIDALHRLSMDEAEPFAGVSKHIWQSLIGASLSSYHELHCAKQSGLEETCKVLHLAKTCKSSSQVLCAVADYLDYVHSRTILPADNSHGKYHPELEAEKVEDVVVIYADNLCHSDKAIRVPTLRILCHYEPLTYEDSTMDQPPEKKMKTETGVPHACPVDIHGCNVIHLLLSIEATPLSISTSRKLSLLISRIHMDLAAGRISETYIPLVLNGVLGIFHNRFSYLWNPASECLAVLISKHVGFVWNKLVRYFQHCQSIFQISQDELDKPSFKLPDKSADLVERFNLFVSPASDSTPHGTVLSLLLQSLQKIPSVVEAQSRQVIPLFLDFLAYNIDNLVSVRSFNSSICKGKEWKSVLKEWLNLLKLMRNPKTFYKSQFLKDVLQNRLLDENDAEIQMKVLDCLLVWKDDFLIPYHQHLRNLINSKSLREELTTWSLSRESHLIEDDHRSNLVPLVICLLMPKVRKLKTLASRKHASIYHRKAVLCFVAQLDVDELPLFFALLIKSLEIIPKGTDDGAFWEKPYCNMEEFQEYSFLKFFTIENLASLSWKKSHGFLHVIEDVIRVFDELHVGPFLNLLIGCVVRVLASCTSSLDFLKGCGSSVVENHANTDSTLLAKDNLAGKNQGQISSAMKQLKDIRSLCLRILSTVLNKYGDHDYDCDFWDLFFQSVKPLIDAFKQEGSSSEKPSSLFSCFLAMSRSHRLVSLLEREENLIPDIFSILTVMTASEAIVSSVLKFIENLLNLDNEVDGEYSAIKKVLLPNVATLISSLHFLFQCAAKRKLVNGETVIRILQLLSQYIKDPLEAGKFLDILLPFLAKGVKDSEVVVKVLHVLRDIIPVAGTGSTKKVLNALSPLLAYVELDMRSSICDLLDSLAKADPSVFPVAKLVSELNATSAVEMGGLDYDSIVTAYDKIGIDLFHTIEVDHSLVILSHCVRDMSSDEMILRHSAYRSLLSFVEFSSLILNRERCNTREVMQAVDDGLWTIGSIQRIINKFILKRMGEAMTRGSNVKKEWVDLLREMVLKLPQLSNLNSLKDLCSGDTEVDFFNNIIHLQKHRRARALTRFRKVVSASNTSEGLVNKVFVPLFFNMLFDVQDENVRSACSEALASISTHLKWKSYSALLMRCFQEMEKNPQKQKILLRLFCSILDEFHFSQLCSSQEANDPSTNALDANLDNNSSSIILQNCHNSMTITEIKTCLYDTMLPKLQKLLYADSEKANVDISRAVLKVLKLLPGDIMDSQLPSIIHRISNFLKSRSDGIRNSARIALADCLKELGLEYLQFIVRVLRSILKRGYELHVMGYTLNFILSKSLSRSTSCKLDYCLEELLSVAGNDILGDVAEQKEVEKIASKMIETRKQKSFETLELIAQNITFRSHASKLLSVVTAHLQNHLTPKVKSKLESMLNHIAAGIERNPSVDQTDLFVFIYDLVKKQIEEENDLHANSSSKGANNYKNDVRGKTISSGRVIVAKSTCSHLITVFALGLLHKRLKNLKLKKHDEELLSKLDSFVTILGNCLSSKYEDILSASLRCLAPLISLPLPSLKSQADKMKATLLDIAHGSATSSSLLMQSCLNLLTKLLRTTDITLSADQLHELIQFPLFVDLERNPSDVALSLLKAIVNRKLVVPEIYDVVIQVAELMVTSQEESIRKKCSHILLQFLLDYQLSDKRLQQHLDFLLANLSYKHPSGREAVLEMLHVIIKKFPQTKLDEQSNTLFLHLVFRLVNDPDNTVRLMIGVALKLLVGRISSHSLYSILEYSLSWYLDGMQQLQSAGAQVLGLLVEVMKKDFQEHIDIVLQEAISILQSTKNIVEQQLDLPDETTIPFWKDAYYSLVLLEKILCHFPDILLDTRLENLWEAICELLLHPHTWLRNISNRLIAMYFAAVTEARREDGEKSFGDFFLIKPSRVFMIAVSLCCQLETQDSFDDAFSNHITENLVSAICNMHSFRGYMECADFQNFWSNLGQHEQGLFLRAFQLLDLRKGRGLFLSIISGAGDQNDCLASGDFQYLLVSNLLKKMGKIALQKDATIQMKIIFNTFRLISSKISQDYLQRYVVHMLPSLYKVCEGFAGKNIPDDLKQLAKEVSDSIRDTLGGQIFVQVYNEIRKNLKAKRDKRKQEDKRMAVVNPMRNAKRKLRVAAKHRANKKRKIMTMRMGRWLR